Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23769.1Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. (269 aa)    
Predicted Functional Partners:
EAQ23766.1
COG3736 Type IV secretory pathway, component VirB8.
 
     0.903
EAQ23767.1
Hypothetical protein.
 
     0.902
EAQ23765.1
Conjugal transfer protein, trbG; COG3504 Type IV secretory pathway, VirB9 components.
 
     0.898
EAQ24172.1
COG1749 Flagellar hook protein FlgE.
  
 
 0.879
EAQ23771.1
Type IV secretion system protein B4, putative; COG3451 Type IV secretory pathway, VirB4 components.
 
     0.877
EAQ23772.1
Hypothetical protein; COG3702 Type IV secretory pathway, VirB3 components.
 
     0.877
EAQ23773.1
Hypothetical protein.
 
     0.868
EAQ23764.1
Type IV secretion system protein B10, putative; COG0845 Membrane-fusion protein.
 
     0.867
EAQ24174.1
Flagellar hook-associated protein FlgL family protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.839
EAQ24231.1
Flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.839
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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