Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EAQ23813.1Hypothetical protein; COG1309 Transcriptional regulator. (204 aa)    
Predicted Functional Partners:
EAQ23812.1
Probable propionyl-CoA carboxylase (beta subunit); COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
 
     0.802
EAQ23809.1
COG1960 Acyl-CoA dehydrogenases.
 
     0.799
EAQ23810.1
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
       0.773
EAQ23811.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.773
EAQ23819.1
Phenylacetic acid degradation-related protein:Thioesterase superfamily protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.750
EAQ23843.1
Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
  
     0.725
EAQ23808.1
bioY family protein.
 
     0.696
EAQ23820.1
COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.689
EAQ23842.1
COG2030 Acyl dehydratase.
  
     0.638
EAQ23854.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
  
     0.605
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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