Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ23825.1Hypothetical protein; COG2207 AraC-type DNA-binding domain-containing proteins. (243 aa)    
Predicted Functional Partners:
EAQ23824.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
 
     0.912
EAQ23821.1
COG1309 Transcriptional regulator.
 
     0.857
EAQ23823.1
COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
 
  
  0.840
EAQ23826.1
Thioesterase family protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.796
EAQ23843.1
Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
  
     0.695
EAQ24514.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.685
EAQ23836.1
COG0372 Citrate synthase.
  
     0.683
EAQ23817.1
Oxidoreductase, short-chain dehydrogenase/reductase family protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.671
EAQ23822.1
Probable short chain dehyrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.668
EAQ23854.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
  
     0.668
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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