Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ23877.1HlyD family secretion protein; COG0845 Membrane-fusion protein. (325 aa)    
Predicted Functional Partners:
EAQ23879.1
COG0842 ABC-type multidrug transport system, permease component.
 
  
 0.977
EAQ23878.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
  
 0.972
EAQ27187.1
Type I secretion outer membrane protein, TolC family protein; COG1538 Outer membrane protein.
  
 0.958
EAQ24974.1
COG1538 Outer membrane protein.
  
 0.900
EAQ23883.1
Secretion protein, HlyD family protein; COG1566 Multidrug resistance efflux pump.
 
  
 
0.827
EAQ23334.1
COG5283 Phage-related tail protein.
  
 0.821
EAQ25678.1
Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein.
    
  0.774
EAQ25936.1
COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
  0.771
EAQ25742.1
Cation/multidrug efflux pump, membrane-fusion protein; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
  0.766
EAQ23870.1
COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
  0.763
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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