Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAQ23878.1ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component. (913 aa)    
Predicted Functional Partners:
EAQ23877.1
HlyD family secretion protein; COG0845 Membrane-fusion protein.
 
  
 0.972
EAQ23879.1
COG0842 ABC-type multidrug transport system, permease component.
 
 
0.965
lolD
ABC lipoprotein efflux transporter, ATPase subunit, LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
    
 0.929
EAQ26917.1
ABC transporter, inner membrane subunit; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
    
 0.899
EAQ24560.1
OmpA domain protein; COG0226 ABC-type phosphate transport system, periplasmic component.
    
 0.879
EAQ24622.1
ABC transporter, ATP-binding protein; COG1137 ABC-type (unclassified) transport system, ATPase component.
    
  0.879
EAQ25847.1
Hypothetical periplasmic protein TorT; COG1879 ABC-type sugar transport system, periplasmic component.
   
 
 0.877
EAQ23717.1
Putative cell surface polysaccharide export ABC-2 transporter permease protein; Close relative to wzm1Y20833; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
    
 0.876
EAQ24667.1
ABC transporter, permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
    
 0.876
EAQ26897.1
COG0226 ABC-type phosphate transport system, periplasmic component.
    
 0.866
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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