Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23882.1Transcriptional regulator, MarR family protein; COG1846 Transcriptional regulators. (154 aa)    
Predicted Functional Partners:
EAQ23883.1
Secretion protein, HlyD family protein; COG1566 Multidrug resistance efflux pump.
 
  
 0.923
EAQ23884.1
Drug resistance transporter EmrB/QacA subfamily:Twin-arginine translocation pathway signal; COG0477 Permeases of the major facilitator superfamily.
 
   
 0.908
EAQ23881.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
 
     0.747
EAQ24471.1
COG2010 Cytochrome c, mono- and diheme variants.
   
 
  0.527
EAQ23874.1
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B.
 
  
 0.513
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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