Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23896.1Probable ISRm2011-2 transposase protein, C-terminal portion; COG3335 Transposase and inactivated derivatives. (111 aa)    
Predicted Functional Partners:
EAQ23895.1
COG3335 Transposase and inactivated derivatives.
     0.994
EAQ23897.1
Putative transposase of insertion sequence ISRm2011-2, orfA protein; COG3415 Transposase and inactivated derivatives.
 
     0.936
EAQ23111.1
ISSpo6, transposase orfB; COG3335 Transposase and inactivated derivatives.
     0.841
EAQ23094.1
COG3415 Transposase and inactivated derivatives.
  
     0.773
EAQ23898.1
Hypothetical protein.
       0.458
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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