Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAQ23899.1Transposase. (393 aa)    
Predicted Functional Partners:
EAQ23900.1
COG0582 Integrase.
 
     0.928
EAQ23878.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
    
 0.791
EAQ23790.1
COG0642 Signal transduction histidine kinase.
   
 0.789
EAQ27445.1
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
   
 0.785
EAQ26608.1
Sensory box histidine kinase/response regulator; COG5002 Signal transduction histidine kinase.
   
 0.758
EAQ26030.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein; COG4597 ABC-type amino acid transport system, permease component.
  
 
 0.695
EAQ25379.1
Response regulator receiver:ATP-binding region,ATPase-like:Histidine kinase A, N-terminal; COG0642 Signal transduction histidine kinase.
   
 0.692
lolD
ABC lipoprotein efflux transporter, ATPase subunit, LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
    
 0.678
EAQ25196.1
Polar amino acid uptake family ABC transporter, permease protein; COG4160 ABC-type arginine/histidine transport system, permease component.
  
 
 0.675
EAQ24622.1
ABC transporter, ATP-binding protein; COG1137 ABC-type (unclassified) transport system, ATPase component.
     
  0.650
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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