STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23043.1Hypothetical protein. (294 aa)    
Predicted Functional Partners:
EAQ23042.1
Hypothetical protein; COG1386 Predicted transcriptional regulator containing the HTH domain.
 
     0.941
EAQ23044.1
Yld; Resembles DNA integrases; possible role in plasmid maintenance; COG0582 Integrase; Belongs to the 'phage' integrase family.
 
     0.894
EAQ24835.1
Yld; Resembles DNA integrases; possible role in plasmid maintenance; COG0582 Integrase; Belongs to the 'phage' integrase family.
 
     0.779
EAQ24837.1
Hypothetical protein; COG1386 Predicted transcriptional regulator containing the HTH domain.
 
     0.754
EAQ23102.1
Hypothetical protein; COG1386 Predicted transcriptional regulator containing the HTH domain.
 
     0.743
EAQ22911.1
Hypothetical protein.
  
     0.726
EAQ22910.1
Hypothetical protein.
  
     0.670
EAQ24751.1
T-DNA border endonuclease; COG3843 Type IV secretory pathway, VirD2 components (relaxase).
  
     0.548
EAQ24732.1
Conjugal transfer protein, trbC; COG3838 Type IV secretory pathway, VirB2 components (pilins).
  
     0.545
EAQ24729.1
Hypothetical protein.
  
     0.485
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.