Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23046.1Hypothetical protein; COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain. (85 aa)    
Predicted Functional Partners:
EAQ23045.1
Hypothetical protein; COG3668 Plasmid stabilization system protein.
 
 
 0.993
EAQ24834.1
Hypothetical protein; COG3668 Plasmid stabilization system protein; Belongs to the RelE toxin family.
 
 
 0.895
EAQ23047.1
TonB-dependent receptor protein; COG1961 Site-specific recombinases, DNA invertase Pin homologs.
       0.520
EAQ23714.1
Hypothetical protein.
  
     0.501
EAQ23713.1
Glycosyl transferase, group 1; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.485
EAQ24426.1
Hypothetical protein; COG1283 Na+/phosphate symporter.
  
     0.463
EAQ26061.1
COG0642 Signal transduction histidine kinase.
  
     0.463
EAQ23519.1
Hypothetical protein.
  
     0.463
EAQ22998.1
ParB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
     0.404
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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