Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ23047.1TonB-dependent receptor protein; COG1961 Site-specific recombinases, DNA invertase Pin homologs. (294 aa)    
Predicted Functional Partners:
EAQ24507.1
Recombinase; COG1961 Site-specific recombinases, DNA invertase Pin homologs.
  
     0.702
EAQ26597.1
Recombinase; COG1961 Site-specific recombinases, DNA invertase Pin homologs.
  
     0.690
EAQ26812.1
Resolvase, N-terminal; COG1961 Site-specific recombinases, DNA invertase Pin homologs.
  
     0.667
EAQ26843.1
Resolvase, N-terminal; COG1961 Site-specific recombinases, DNA invertase Pin homologs.
  
     0.636
EAQ23048.1
RepA partitioning protein/ATPase, ParA type; COG1192 ATPases involved in chromosome partitioning.
 
     0.622
EAQ23049.1
Rep B partitioning protein/ParB-like protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
 
     0.589
EAQ23050.1
Replication initiator RepC.
 
     0.530
EAQ22994.1
Hypothetical protein.
  
     0.525
EAQ23045.1
Hypothetical protein; COG3668 Plasmid stabilization system protein.
       0.520
EAQ23046.1
Hypothetical protein; COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain.
       0.520
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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