Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23065.1Hypothetical protein. (57 aa)    
Predicted Functional Partners:
EAQ23064.1
Hypothetical protein; COG0195 Transcription elongation factor.
 
     0.947
EAQ23070.1
Hypothetical protein; COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase.
 
     0.815
EAQ23063.1
Hypothetical protein.
 
     0.798
EAQ23072.1
Hypothetical protein.
 
     0.738
EAQ22859.1
Hypothetical protein.
 
     0.733
EAQ23073.1
Hypothetical protein.
 
     0.732
EAQ23052.1
Hypothetical protein.
  
     0.709
EAQ24823.1
Hypothetical protein.
  
     0.706
EAQ22852.1
Hypothetical protein.
 
     0.692
EAQ24798.1
Hypothetical protein.
 
     0.692
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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