Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ22872.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
EAQ22873.1
Hypothetical protein.
 
   
 0.962
EAQ22874.1
COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
       0.773
EAQ23366.1
Membrane protein, putative.
  
     0.559
EAQ22870.1
COG3316 Transposase and inactivated derivatives.
       0.501
EAQ22871.1
TRAP dicarboxylate family transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
       0.501
EAQ22875.1
COG3316 Transposase and inactivated derivatives.
       0.489
EAQ23061.1
Hypothetical protein.
 
     0.475
EAQ22911.1
Hypothetical protein.
  
     0.437
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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