STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24707.1Superoxide dismutase SodM-like protein; COG0607 Rhodanese-related sulfurtransferase. (277 aa)    
Predicted Functional Partners:
EAQ24706.1
COG2059 Chromate transport protein ChrA.
   
 0.950
EAQ23134.1
Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.938
EAQ26540.1
Oxidoreductase, FAD-binding, putative; COG3182 Uncharacterized iron-regulated membrane protein.
    
 0.908
ybeY
Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.869
EAQ24471.1
COG2010 Cytochrome c, mono- and diheme variants.
    
 0.826
rpsQ
Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.800
EAQ26682.1
COG0155 Sulfite reductase, beta subunit (hemoprotein).
    
 0.721
EAQ26681.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
     
 0.694
EAQ25977.1
Thiosulfate sulfurtransferase, putative; COG2897 Rhodanese-related sulfurtransferase.
   
 0.689
EAQ26933.1
COG2897 Rhodanese-related sulfurtransferase.
   
 0.689
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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