Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24754.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
EAQ22901.1
T-DNA border endonuclease; COG3843 Type IV secretory pathway, VirD2 components (relaxase).
  
     0.771
EAQ24756.1
Hypothetical protein.
  
     0.770
EAQ22869.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.770
EAQ24768.1
Hypothetical protein.
  
     0.769
EAQ22862.1
Hypothetical protein.
  
     0.769
EAQ22911.1
Hypothetical protein.
  
     0.764
EAQ22830.1
Hypothetical protein.
  
     0.763
EAQ22900.1
Hypothetical protein.
  
     0.762
EAQ24778.1
Hypothetical protein.
  
     0.760
EAQ24779.1
Hypothetical protein.
  
     0.746
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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