Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ24760.1Hypothetical protein; Belongs to the D-glutamate cyclase family. (286 aa)    
Predicted Functional Partners:
EAQ24761.1
COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.920
EAQ24762.1
TRAP transporter, transmembrane protein, putative; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.874
EAQ24758.1
Hypothetical protein.
 
     0.831
EAQ24759.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.772
EAQ24763.1
TRAP dicarboxylate transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
     0.700
EAQ23935.1
Hypothetical protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
     0.653
EAQ24764.1
5-oxoprolinase (ATP-hydrolyzing); COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
       0.622
EAQ23934.1
Putative transport protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.585
EAQ25731.1
Transcriptional regulator, IclR family protein; COG1414 Transcriptional regulator.
  
    0.493
EAQ23659.1
COG1414 Transcriptional regulator.
  
    0.493
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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