Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24774.1Hypothetical protein. (50 aa)    
Predicted Functional Partners:
EAQ24777.1
HtaR suppressor protein; COG2002 Regulators of stationary/sporulation gene expression.
    
 0.823
EAQ24776.1
Hypothetical protein.
    
 0.821
EAQ24775.1
Hypothetical protein.
       0.776
EAQ23114.1
COG4115 Uncharacterized protein conserved in bacteria.
    
 0.744
EAQ23113.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.729
EAQ23045.1
Hypothetical protein; COG3668 Plasmid stabilization system protein.
   
   0.689
EAQ24834.1
Hypothetical protein; COG3668 Plasmid stabilization system protein; Belongs to the RelE toxin family.
   
   0.689
EAQ22831.1
htrA suppressor protein sohA, putative; COG2002 Regulators of stationary/sporulation gene expression.
    
 0.641
EAQ22832.1
Hypothetical protein.
     
 0.638
EAQ24773.1
Hypothetical protein.
       0.524
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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