Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24792.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
EAQ24791.1
Hypothetical protein.
 
 
 0.994
EAQ22853.1
Hypothetical protein.
  
 
 0.823
EAQ24790.1
Hypothetical protein.
  
     0.538
EAQ23004.1
Hypothetical protein.
  
     0.526
EAQ24781.1
Hypothetical protein.
  
     0.472
EAQ22826.1
Hypothetical protein.
  
     0.459
EAQ24780.1
ParB-like nuclease; COG1475 Predicted transcriptional regulators.
  
     0.456
EAQ22827.1
Hypothetical protein; COG1475 Predicted transcriptional regulators.
  
     0.454
EAQ23005.1
COG4227 Antirestriction protein.
  
     0.439
EAQ24789.1
COG4227 Antirestriction protein.
  
     0.433
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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