Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ24837.1Hypothetical protein; COG1386 Predicted transcriptional regulator containing the HTH domain. (197 aa)    
Predicted Functional Partners:
EAQ27052.1
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
 
 0.983
EAQ24836.1
Hypothetical protein.
 
     0.941
smc
SMC protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 
 0.764
EAQ23043.1
Hypothetical protein.
 
     0.755
EAQ23044.1
Yld; Resembles DNA integrases; possible role in plasmid maintenance; COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.755
EAQ24835.1
Yld; Resembles DNA integrases; possible role in plasmid maintenance; COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.755
cmk
COG0283 Cytidylate kinase.
  
  
 0.652
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
  
 0.518
EAQ24838.1
Hypothetical protein.
       0.498
EAQ25350.1
COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.
  
  
 0.494
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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