Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
Databases
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[Homology]
Score
EAQ24845.1Hypothetical protein. (117 aa)    
Predicted Functional Partners:
EAQ24846.1
Hypothetical protein; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase.
 
    0.832
EAQ23537.1
Formate dehydrogenase, beta subunit; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
     
  0.641
EAQ25176.1
Hypothetical protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
  
     0.593
EAQ24471.1
COG2010 Cytochrome c, mono- and diheme variants.
  
 
  0.573
EAQ24847.1
Secreted protein MPB70-like; Similar to transforming growth factor-induced protein; COG2335 Secreted and surface protein containing fasciclin-like repeats.
       0.568
mnmG
Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
    
 
 0.558
EAQ26622.1
Selenide, water dikinase, putative; COG1252 NADH dehydrogenase, FAD-containing subunit.
 
 
 0.542
EAQ23340.1
COG2717 Predicted membrane protein.
  
 
 0.487
EAQ24844.1
COG3316 Transposase and inactivated derivatives.
       0.462
EAQ26221.1
Phospholipase D/Transphosphatidylase; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
  
     0.437
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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