STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24862.1COG3547 Transposase and inactivated derivatives. (126 aa)    
Predicted Functional Partners:
EAQ24861.1
COG3316 Transposase and inactivated derivatives.
       0.773
EAQ23781.1
COG3547 Transposase and inactivated derivatives.
  
     0.767
EAQ24757.1
IS1111A/IS1328/IS1533 family transposase; COG3547 Transposase and inactivated derivatives.
  
     0.762
EAQ25933.1
COG3547 Transposase and inactivated derivatives.
  
     0.755
EAQ24767.1
COG3547 Transposase and inactivated derivatives.
  
     0.753
EAQ24860.1
Type II and III secretion system protein; COG4964 Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family.
 
     0.556
EAQ23865.1
Transposase (24).
  
     0.445
EAQ23794.1
Transposase (24).
  
     0.435
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.