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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23077.1Hypothetical protein; COG3702 Type IV secretory pathway, VirB3 components. (90 aa)    
Predicted Functional Partners:
EAQ23078.1
Hypothetical protein; COG0480 Translation elongation factors (GTPases).
 
 
 0.986
EAQ22918.1
Type IV secretion system protein B4, putative; COG3451 Type IV secretory pathway, VirB4 components.
 
 
 0.944
EAQ24734.1
Type IV secretion system protein B4, putative; COG3451 Type IV secretory pathway, VirB4 components.
 
 
 0.942
EAQ22915.1
COG3736 Type IV secretory pathway, component VirB8.
 
 
 0.941
EAQ23771.1
Type IV secretion system protein B4, putative; COG3451 Type IV secretory pathway, VirB4 components.
 
 
 0.940
EAQ24740.1
COG3736 Type IV secretory pathway, component VirB8.
 
 
 0.934
EAQ23766.1
COG3736 Type IV secretory pathway, component VirB8.
 
 
 0.926
EAQ23767.1
Hypothetical protein.
 
  
 0.913
EAQ22909.1
Hypothetical protein; COG3704 Type IV secretory pathway, VirB6 components.
 
  
 0.905
EAQ22913.1
Conjugal transfer protein; COG2948 Type IV secretory pathway, VirB10 components.
 
  
 0.899
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.