Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23079.1COG1276 Putative copper export protein. (320 aa)    
Predicted Functional Partners:
EAQ23080.1
COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC.
 
  
 0.967
EAQ23081.1
COG2010 Cytochrome c, mono- and diheme variants.
       0.776
EAQ23082.1
Hypothetical protein.
 
     0.681
EAQ23084.1
Putative cation efflux system transmembrane protein; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.564
EAQ23083.1
Putative cation efflux system transmembrane protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.470
EAQ23554.1
Copper-translocating P-type ATPase; COG2217 Cation transport ATPase.
     
 0.416
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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