Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23080.1COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC. (131 aa)    
Predicted Functional Partners:
EAQ23079.1
COG1276 Putative copper export protein.
 
  
 0.967
EAQ23081.1
COG2010 Cytochrome c, mono- and diheme variants.
       0.773
EAQ27404.1
Membrane protein, putative; COG3182 Uncharacterized iron-regulated membrane protein.
 
    0.741
EAQ24921.1
COG2847 Uncharacterized protein conserved in bacteria.
  
  
 0.726
EAQ23302.1
COG2847 Uncharacterized protein conserved in bacteria.
  
  
 0.726
EAQ27265.1
COG2847 Uncharacterized protein conserved in bacteria.
  
  
 0.726
EAQ27360.1
COG2847 Uncharacterized protein conserved in bacteria.
  
  
 0.726
EAQ26540.1
Oxidoreductase, FAD-binding, putative; COG3182 Uncharacterized iron-regulated membrane protein.
  
    0.704
EAQ23082.1
Hypothetical protein.
 
     0.639
EAQ24950.1
Sarcosine oxidase, alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
  
 
   0.590
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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