Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23087.1COG3544 Uncharacterized protein conserved in bacteria. (158 aa)    
Predicted Functional Partners:
EAQ23088.1
COG2217 Cation transport ATPase.
  
    0.720
EAQ22975.1
COG0695 Glutaredoxin and related proteins.
 
     0.593
EAQ23086.1
COG0789 Predicted transcriptional regulators.
       0.536
EAQ23179.1
COG4325 Predicted membrane protein.
  
     0.535
EAQ23339.1
COG0531 Amino acid transporters.
 
     0.441
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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