Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ23097.1COG0031 Cysteine synthase. (359 aa)    
Predicted Functional Partners:
EAQ23972.1
COG1045 Serine acetyltransferase.
 
 0.960
EAQ26540.1
Oxidoreductase, FAD-binding, putative; COG3182 Uncharacterized iron-regulated membrane protein.
  
 
 0.943
EAQ26748.1
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
 
 0.908
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 0.888
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
  
  
 0.803
EAQ26682.1
COG0155 Sulfite reductase, beta subunit (hemoprotein).
  
 
 0.798
EAQ23098.1
Putative transcriptional regulator; COG3710 DNA-binding winged-HTH domains.
 
     0.744
cysS
COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.712
EAQ26132.1
COG3453 Uncharacterized protein conserved in bacteria.
     
 0.711
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
 
 0.700
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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