Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23107.1Type I secretion target repeat protein. (371 aa)    
Predicted Functional Partners:
EAQ25200.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
  0.796
EAQ24609.1
core-2/I-branching enzyme family protein.
  
     0.740
EAQ26348.1
Flagellar motor protein; COG0419 ATPase involved in DNA repair.
   
 0.734
EAQ24608.1
Hypothetical protein.
  
     0.716
EAQ24662.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.686
EAQ25066.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
  0.666
EAQ27164.1
Hypothetical protein.
  
 
   0.665
EAQ25199.1
COG3562 Capsule polysaccharide export protein.
  
     0.657
EAQ26397.1
Possible protease; COG0301 Thiamine biosynthesis ATP pyrophosphatase; Belongs to the peptidase S8 family.
  
 0.641
EAQ26771.1
Hypothetical protein.
  
     0.639
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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