Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ22904.1COG1396 Predicted transcriptional regulators. (373 aa)    
Predicted Functional Partners:
EAQ22903.1
Hypothetical protein; COG1855 ATPase (PilT family).
 
     0.957
EAQ22908.1
Hypothetical protein.
 
     0.887
EAQ22907.1
Hypothetical protein.
 
     0.886
EAQ22906.1
Patatin; COG3621 Patatin.
 
     0.874
EAQ22905.1
Hypothetical protein.
 
     0.830
EAQ23366.1
Membrane protein, putative.
  
     0.640
EAQ25880.1
Fumarate hydratase, class I, putative; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.523
EAQ23495.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
     
  0.523
nadE
NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
  0.523
EAQ24739.1
Similar to Legionella vir protein; COG3704 Type IV secretory pathway, VirB6 components.
  
     0.521
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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