STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ22930.1COG1230 Co/Zn/Cd efflux system component. (304 aa)    
Predicted Functional Partners:
EAQ22931.1
Hypothetical protein.
 
     0.867
EAQ22929.1
COG2020 Putative protein-S-isoprenylcysteine methyltransferase.
 
     0.825
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
    0.756
EAQ24198.1
COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.518
EAQ22928.1
ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein; COG1376 Uncharacterized protein conserved in bacteria.
       0.517
EAQ23554.1
Copper-translocating P-type ATPase; COG2217 Cation transport ATPase.
  
 
 0.406
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.