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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23313.1Cytochrome c Hsc; COG0107 Imidazoleglycerol-phosphate synthase. (626 aa)    
Predicted Functional Partners:
phnC
ABC phosphate/phosphonate transport system ATPase; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
    0.955
EAQ23314.1
COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
 
     0.947
EAQ23316.1
COG3639 ABC-type phosphate/phosphonate transport system, permease component.
 
     0.908
EAQ23312.1
Hypothetical protein; COG1321 Mn-dependent transcriptional regulator.
 
     0.774
EAQ26697.1
Alkaline phosphatase; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
  
 
 0.690
EAQ26109.1
Selenium-binding protein, putative.
  
 
 0.670
EAQ23294.1
Cytochrome c-type biogenesis protein cycH; COG4235 Cytochrome c biogenesis factor.
  
   
 0.669
EAQ25987.1
Hypothetical protein.
  
 
 0.659
tolB
Translocation protein TolB precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
   0.561
EAQ23876.1
Hypothetical protein.
  
    0.455
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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