Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23319.1Hypothetical protein. (89 aa)    
Predicted Functional Partners:
EAQ24899.1
COG1376 Uncharacterized protein conserved in bacteria.
  
     0.760
EAQ22927.1
COG1376 Uncharacterized protein conserved in bacteria.
  
     0.755
EAQ23320.1
COG1376 Uncharacterized protein conserved in bacteria.
  
     0.690
EAQ25576.1
Hypothetical protein.
  
     0.449
EAQ23318.1
Cadmium-translocating P-type ATPase; COG2217 Cation transport ATPase.
 
     0.414
EAQ22970.1
Hypothetical protein; COG2608 Copper chaperone.
  
     0.407
EAQ23373.1
COG0642 Signal transduction histidine kinase.
  
     0.406
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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