Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EAQ23346.1Metallo-beta-lactamase family protein; COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing. (460 aa)    
Predicted Functional Partners:
EAQ23345.1
COG0213 Thymidine phosphorylase.
    0.982
gpmI
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
 0.955
EAQ26382.1
WD domain/cytochrome c family protein; COG2319 FOG: WD40 repeat.
   
 0.926
EAQ24288.1
Hypothetical protein.
    
 0.922
EAQ23344.1
COG0462 Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family.
 
     0.917
EAQ23347.1
Hypothetical protein; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
     0.831
EAQ24859.1
COG0457 FOG: TPR repeat.
   
  0.828
EAQ25142.1
TPR domain protein; COG0457 FOG: TPR repeat.
   
  0.828
EAQ25855.1
Methyltransferase, FkbM family protein; COG0438 Glycosyltransferase.
   
  0.828
EAQ23587.1
Hypothetical protein.
    
 0.821
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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