EAQ23364.1 protein (Roseovarius sp. 217) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EAQ23364.1

COG1288 Predicted membrane protein. (482 aa)

Predicted Functional Partners:

arcA

0.956

EAQ23361.1

0.947

EAQ23362.1

0.925

EAQ23365.1

0.759

EAQ23360.1

0.608

EAQ27104.1

0.408

Your Current Organism:

Roseovarius sp. 217

NCBI taxonomy Id: 314264
Other names: R. sp. 217

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ23360.1	EAQ23361.1	ROS217_03290	ROS217_03295	Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).	COG0549 Carbamate kinase; Belongs to the carbamate kinase family.	0.758
EAQ23360.1	EAQ23362.1	ROS217_03290	ROS217_03300	Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	0.727
EAQ23360.1	EAQ23364.1	ROS217_03290	ROS217_03310	Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).	COG1288 Predicted membrane protein.	0.608
EAQ23360.1	EAQ23365.1	ROS217_03290	ROS217_03315	Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).	Putative cation-transporting ATPase; COG2217 Cation transport ATPase.	0.580
EAQ23360.1	arcA	ROS217_03290	ROS217_03305	Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).	COG2235 Arginine deiminase.	0.675
EAQ23361.1	EAQ23360.1	ROS217_03295	ROS217_03290	COG0549 Carbamate kinase; Belongs to the carbamate kinase family.	Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).	0.758
EAQ23361.1	EAQ23362.1	ROS217_03295	ROS217_03300	COG0549 Carbamate kinase; Belongs to the carbamate kinase family.	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	0.997
EAQ23361.1	EAQ23364.1	ROS217_03295	ROS217_03310	COG0549 Carbamate kinase; Belongs to the carbamate kinase family.	COG1288 Predicted membrane protein.	0.947
EAQ23361.1	EAQ23365.1	ROS217_03295	ROS217_03315	COG0549 Carbamate kinase; Belongs to the carbamate kinase family.	Putative cation-transporting ATPase; COG2217 Cation transport ATPase.	0.625
EAQ23361.1	EAQ27104.1	ROS217_03295	ROS217_21297	COG0549 Carbamate kinase; Belongs to the carbamate kinase family.	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	0.979
EAQ23361.1	arcA	ROS217_03295	ROS217_03305	COG0549 Carbamate kinase; Belongs to the carbamate kinase family.	COG2235 Arginine deiminase.	0.997
EAQ23362.1	EAQ23360.1	ROS217_03300	ROS217_03290	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).	0.727
EAQ23362.1	EAQ23361.1	ROS217_03300	ROS217_03295	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	COG0549 Carbamate kinase; Belongs to the carbamate kinase family.	0.997
EAQ23362.1	EAQ23364.1	ROS217_03300	ROS217_03310	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	COG1288 Predicted membrane protein.	0.925
EAQ23362.1	EAQ23365.1	ROS217_03300	ROS217_03315	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	Putative cation-transporting ATPase; COG2217 Cation transport ATPase.	0.619
EAQ23362.1	EAQ27104.1	ROS217_03300	ROS217_21297	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	0.701
EAQ23362.1	arcA	ROS217_03300	ROS217_03305	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	COG2235 Arginine deiminase.	0.996
EAQ23364.1	EAQ23360.1	ROS217_03310	ROS217_03290	COG1288 Predicted membrane protein.	Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).	0.608
EAQ23364.1	EAQ23361.1	ROS217_03310	ROS217_03295	COG1288 Predicted membrane protein.	COG0549 Carbamate kinase; Belongs to the carbamate kinase family.	0.947
EAQ23364.1	EAQ23362.1	ROS217_03310	ROS217_03300	COG1288 Predicted membrane protein.	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.	0.925