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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23369.1Membrane protein, putative. (228 aa)    
Predicted Functional Partners:
EAQ23370.1
Hypothetical protein.
 
     0.788
EAQ23373.1
COG0642 Signal transduction histidine kinase.
 
     0.695
EAQ23371.1
Hypothetical protein.
 
     0.662
EAQ23917.1
Hypothetical protein.
 
     0.600
EAQ22966.1
COG2010 Cytochrome c, mono- and diheme variants.
  
     0.586
EAQ23367.1
Sigma-70 region 2; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family.
 
     0.555
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.532
EAQ22964.1
Hypothetical protein.
 
     0.529
EAQ23339.1
COG0531 Amino acid transporters.
 
 
   0.495
EAQ24891.1
Hypothetical protein.
 
     0.471
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.