Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ22965.1COG1376 Uncharacterized protein conserved in bacteria. (122 aa)    
Predicted Functional Partners:
EAQ23317.1
ErfK/YbiS/YcfS/YnhG family protein; COG3034 Uncharacterized protein conserved in bacteria.
 
  
 0.687
EAQ22966.1
COG2010 Cytochrome c, mono- and diheme variants.
       0.664
EAQ23398.1
ErfK/YbiS/YcfS/YnhG family protein; COG3034 Uncharacterized protein conserved in bacteria.
 
  
 0.657
EAQ24077.1
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D- alanine-endopeptidase; COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4).
  
  
 0.573
EAQ25661.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
     
 0.554
EAQ23399.1
Lipoprotein, putative; COG2340 Uncharacterized protein with SCP/PR1 domains.
 
   
 0.522
mepA
COG3770 Murein endopeptidase.
  
     0.495
EAQ26583.1
Tat (twin-arginine translocation) pathway signal sequence domain protein; COG3108 Uncharacterized protein conserved in bacteria.
 
     0.419
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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