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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ22972.1COG0789 Predicted transcriptional regulators. (140 aa)    
Predicted Functional Partners:
EAQ22971.1
Copper-translocating P-type ATPase; COG2217 Cation transport ATPase.
  
  
 0.765
EAQ22973.1
Hypothetical protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
       0.755
EAQ24871.1
Two-component sensor; COG0642 Signal transduction histidine kinase.
   
 0.719
EAQ27445.1
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
   
 0.694
EAQ22970.1
Hypothetical protein; COG2608 Copper chaperone.
 
  
 0.649
EAQ22975.1
COG0695 Glutaredoxin and related proteins.
    
 0.605
EAQ26608.1
Sensory box histidine kinase/response regulator; COG5002 Signal transduction histidine kinase.
   
 0.602
rpoD
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.594
EAQ23495.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
    
  0.590
EAQ23790.1
COG0642 Signal transduction histidine kinase.
    
 0.569
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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