Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ22974.1COG3544 Uncharacterized protein conserved in bacteria. (289 aa)    
Predicted Functional Partners:
EAQ22975.1
COG0695 Glutaredoxin and related proteins.
 
     0.912
EAQ22976.1
Uncharacterized conserved membrane protein, probable transporter; COG0701 Predicted permeases.
 
     0.635
EAQ22973.1
Hypothetical protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
 
     0.622
EAQ23179.1
COG4325 Predicted membrane protein.
  
     0.520
EAQ22972.1
COG0789 Predicted transcriptional regulators.
       0.514
EAQ22971.1
Copper-translocating P-type ATPase; COG2217 Cation transport ATPase.
  
    0.505
EAQ23339.1
COG0531 Amino acid transporters.
 
     0.420
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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