Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAQ22999.1Replication protein C. (360 aa)    
Predicted Functional Partners:
EAQ22998.1
ParB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
 
   
 0.889
EAQ22997.1
ATPase, ParA type; COG1192 ATPases involved in chromosome partitioning.
 
   
 0.839
EAQ23002.1
Hypothetical protein.
 
     0.815
EAQ24794.1
Hypothetical protein; COG0464 ATPases of the AAA+ class.
  
     0.754
EAQ23000.1
Hypothetical protein; COG0215 Cysteinyl-tRNA synthetase.
 
     0.681
EAQ26061.1
COG0642 Signal transduction histidine kinase.
  
     0.667
EAQ23714.1
Hypothetical protein.
  
     0.665
EAQ26063.1
Arsenite oxidase, small subunit; COG0723 Rieske Fe-S protein.
  
     0.665
EAQ22980.1
Hypothetical protein.
  
     0.649
EAQ26064.1
Arsenite oxidase, large subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
     0.640
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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