Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23005.1COG4227 Antirestriction protein. (271 aa)    
Predicted Functional Partners:
EAQ23004.1
Hypothetical protein.
 
     0.893
EAQ24780.1
ParB-like nuclease; COG1475 Predicted transcriptional regulators.
 
     0.755
EAQ22827.1
Hypothetical protein; COG1475 Predicted transcriptional regulators.
 
     0.752
EAQ24781.1
Hypothetical protein.
 
     0.739
EAQ22826.1
Hypothetical protein.
 
     0.738
EAQ24779.1
Hypothetical protein.
  
     0.719
EAQ22829.1
Hypothetical protein.
  
     0.719
EAQ24790.1
Hypothetical protein.
 
     0.716
EAQ22830.1
Hypothetical protein.
 
     0.695
EAQ24778.1
Hypothetical protein.
 
     0.692
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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