Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ25141.1Helicase, putative; COG0513 Superfamily II DNA and RNA helicases. (733 aa)    
Predicted Functional Partners:
EAQ22810.1
Helicase, putative.
     0.957
EAQ25142.1
TPR domain protein; COG0457 FOG: TPR repeat.
    
  0.806
EAQ25374.1
Hypothetical protein.
  
     0.617
EAQ25143.1
COG3255 Putative sterol carrier protein.
 
     0.612
EAQ25144.1
Hydrolase, alpha/beta fold family protein; COG2267 Lysophospholipase.
       0.611
EAQ27536.1
Cobalt chelatase, pCobT subunit; COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase).
  
     0.599
EAQ22809.1
S4 domain protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).
       0.581
EAQ25048.1
COG3741 N-formylglutamate amidohydrolase.
  
     0.546
atpF
ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.523
EAQ22808.1
Iron-sulfur cluster-binding protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.512
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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