Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ25334.1Bacterial type II/III secretion system protein; COG4964 Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family. (428 aa)    
Predicted Functional Partners:
EAQ25332.1
CpaB family protein; COG3745 Flp pilus assembly protein CpaB.
 
 
 0.991
EAQ25336.1
ATPase, putative; COG4963 Flp pilus assembly protein, ATPase CpaE.
 
 
 0.991
EAQ25339.1
Type II/IV secretion system protein, TadC subfamily protein; COG4965 Flp pilus assembly protein TadB.
 
 
 0.965
EAQ25340.1
Type II/IV secretion system protein, TadC subfamily protein; COG2064 Flp pilus assembly protein TadC.
 
 
 0.964
EAQ25338.1
Type II/IV secretion system protein, TadA subfamily protein; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
 0.957
EAQ25342.1
Lipoprotein, putative; COG0457 FOG: TPR repeat.
 
 0.926
EAQ25335.1
OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
 
    0.914
EAQ25341.1
TPR domain protein; COG0457 FOG: TPR repeat.
 
 0.909
EAQ25343.1
Membrane protein, putative.
 
  
 0.893
EAQ23763.1
VirB11 protein; Part of the Type IV secretion system. Belongs to the GSP E family.
 
 
 0.871
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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