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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25340.1Type II/IV secretion system protein, TadC subfamily protein; COG2064 Flp pilus assembly protein TadC. (325 aa)    
Predicted Functional Partners:
EAQ25339.1
Type II/IV secretion system protein, TadC subfamily protein; COG4965 Flp pilus assembly protein TadB.
 
  
0.999
EAQ24944.1
Hypothetical protein.
 
    0.999
EAQ25336.1
ATPase, putative; COG4963 Flp pilus assembly protein, ATPase CpaE.
 
  
 0.978
EAQ25338.1
Type II/IV secretion system protein, TadA subfamily protein; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.978
EAQ25332.1
CpaB family protein; COG3745 Flp pilus assembly protein CpaB.
 
  
 0.977
EAQ25344.1
Hypothetical protein; COG0606 Predicted ATPase with chaperone activity.
 
    0.945
EAQ24229.1
Flagellin synthesis repressor protein FlbT, putative.
   
    0.924
EAQ25342.1
Lipoprotein, putative; COG0457 FOG: TPR repeat.
 
  
 0.915
EAQ23763.1
VirB11 protein; Part of the Type IV secretion system. Belongs to the GSP E family.
 
  
 0.912
EAQ25341.1
TPR domain protein; COG0457 FOG: TPR repeat.
 
  
 0.906
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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