Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25372.1Hypothetical protein. (112 aa)    
Predicted Functional Partners:
EAQ26138.1
Hypothetical protein.
  
     0.674
EAQ27279.1
Putative transmembrane protein; COG4158 Predicted ABC-type sugar transport system, permease component.
  
     0.660
EAQ27266.1
Hypothetical protein; COG0711 F0F1-type ATP synthase, subunit b.
  
     0.650
EAQ27253.1
Lipoprotein, putative.
  
     0.626
EAQ26683.1
Hypothetical protein; COG0481 Membrane GTPase LepA.
  
     0.625
EAQ25156.1
Hypothetical protein.
  
     0.618
EAQ25660.1
Membrane protein, putative.
  
     0.612
EAQ24573.1
Hypothetical protein.
  
     0.611
EAQ25230.1
COG3115 Cell division protein.
  
     0.556
EAQ23007.1
Hypothetical protein.
  
     0.539
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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