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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25373.1COG0842 ABC-type multidrug transport system, permease component. (261 aa)    
Predicted Functional Partners:
EAQ23411.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.895
EAQ24360.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.882
EAQ23878.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.673
EAQ25374.1
Hypothetical protein.
       0.582
EAQ25989.1
Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 
 0.533
EAQ26531.1
ABC transporter, ATP-binding protein NosF; COG1131 ABC-type multidrug transport system, ATPase component.
 
 
 0.533
EAQ23717.1
Putative cell surface polysaccharide export ABC-2 transporter permease protein; Close relative to wzm1Y20833; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
    
  0.521
EAQ24359.1
COG0842 ABC-type multidrug transport system, permease component.
  
  
 
0.458
EAQ23856.1
ABC transporter related protein; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
  
 
 0.447
EAQ25686.1
Non-ribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.
  
  
 0.446
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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