Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25377.1Hypothetical protein; COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase). (526 aa)    
Predicted Functional Partners:
EAQ25378.1
Hypothetical protein.
 
 
0.881
EAQ26348.1
Flagellar motor protein; COG0419 ATPase involved in DNA repair.
   
 0.734
EAQ27071.1
Lipoprotein, putative; COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase).
  
     0.715
EAQ26397.1
Possible protease; COG0301 Thiamine biosynthesis ATP pyrophosphatase; Belongs to the peptidase S8 family.
  
 0.641
EAQ24560.1
OmpA domain protein; COG0226 ABC-type phosphate transport system, periplasmic component.
 
 
 0.623
EAQ24123.1
Hypothetical protein.
  
     0.611
EAQ26697.1
Alkaline phosphatase; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
  
 0.604
EAQ25200.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
  0.556
EAQ26247.1
FtsK/SpoIIIE family protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
    
 
 0.551
EAQ25691.1
Exopolysaccharide biosynthesis domain protein; COG0489 ATPases involved in chromosome partitioning.
  
 0.544
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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