Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25380.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
EAQ27184.1
Hypothetical protein.
  
     0.748
EAQ27401.1
Hypothetical protein.
  
     0.734
EAQ26958.1
Hypothetical protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
     0.732
EAQ24582.1
Helicase, ATP-dependent, putative; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
  
     0.692
EAQ23531.1
Lipoprotein, putative.
  
     0.652
EAQ27411.1
Hypothetical protein; COG1760 L-serine deaminase.
  
     0.636
EAQ25664.1
Hypothetical protein.
  
    0.624
EAQ27253.1
Lipoprotein, putative.
  
     0.578
EAQ26585.1
COG0236 Acyl carrier protein.
  
     0.556
EAQ26966.1
Hypothetical protein.
  
     0.549
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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