STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25943.1Hydrolase, carbon-nitrogen family protein; COG0388 Predicted amidohydrolase. (294 aa)    
Predicted Functional Partners:
EAQ26327.1
Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
     0.869
EAQ26328.1
Hypothetical protein.
 
     0.865
EAQ24514.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.798
infA
Translation initiation factor; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
 
     0.781
EAQ25429.1
COG0167 Dihydroorotate dehydrogenase.
  
 0.757
EAQ26213.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
  
 0.703
EAQ23495.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
    
  0.682
EAQ25940.1
Putative Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.680
EAQ25939.1
Ribonuclease, Rne/Rng family protein; COG1530 Ribonucleases G and E.
       0.679
yacG
Hypothetical protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.
       0.677
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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