Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25954.1Hypothetical protein. (400 aa)    
Predicted Functional Partners:
EAQ25949.1
General secretion pathway protein E; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
 
 0.923
EAQ25953.1
Hypothetical protein.
  
 
 0.923
EAQ25955.1
General secretion pathway protein K; COG3156 Type II secretory pathway, component PulK.
  
  
 0.878
EAQ25956.1
Hypothetical protein; COG4795 Type II secretory pathway, component PulJ.
     
 0.865
EAQ25959.1
General secretion pathway protein G; COG2165 Type II secretory pathway, pseudopilin PulG.
  
  
 0.844
EAQ25958.1
Hypothetical protein.
  
  
 0.825
EAQ25957.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
       0.817
EAQ25952.1
Hypothetical protein.
       0.786
EAQ25960.1
Peptidase A24A-like; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
     
 0.694
EAQ25966.1
Hypothetical protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
     
 0.479
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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