STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25414.1Putative ABC transporter ATP-binding protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily. (368 aa)    
Predicted Functional Partners:
EAQ25416.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
  0.977
EAQ25415.1
Permease protein of polyamine ABC transporter; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 
  0.966
EAQ26815.1
ABC transporter, permease; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 0.942
EAQ25417.1
Probable binding protein component of ABC transporter; COG0687 Spermidine/putrescine-binding periplasmic protein.
 
 
  0.878
EAQ27425.1
ABC multidrug efflux transporter, fused ATPase and inner membrane subunit; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
    
0.855
EAQ25015.1
ABC permidine/putrescine transporter, inner membrane subunit; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
  0.802
EAQ27431.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
  
 
  0.793
EAQ25758.1
Permease protein of polyamine ABC transporter; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  
  0.786
EAQ25738.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  
  0.780
EAQ25413.1
Transcriptional regulator, AraC family protein; COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
       0.773
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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