STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25532.1Putative oxidoreductase protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (251 aa)    
Predicted Functional Partners:
EAQ23845.1
COG2030 Acyl dehydratase.
 
 
  0.919
EAQ25531.1
Putative transketolase beta subunit protein; COG3958 Transketolase, C-terminal subunit.
 
     0.916
EAQ25530.1
Putative transketolase alpha subunit protein; COG3959 Transketolase, N-terminal subunit.
 
     0.912
EAQ25686.1
Non-ribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.
  
 0.774
EAQ25534.1
Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.756
EAQ27167.1
COG0331 (acyl-carrier-protein) S-malonyltransferase.
 0.754
EAQ24514.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
     
 0.709
EAQ24956.1
COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  0.706
EAQ25688.1
Non-ribosomal peptide synthetase; COG0223 Methionyl-tRNA formyltransferase.
  
 0.686
EAQ25533.1
Putative periplasmic binding protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.678
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.